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Solvation Effects on Molecules and Biomolecules


Solvation Effects on Molecules and Biomolecules

Computational Methods and Applications
Challenges and Advances in Computational Chemistry and Physics, Band 6

von: Sylvio Canuto

CHF 448.50

Verlag: Springer
Format: PDF
Veröffentl.: 03.07.2010
ISBN/EAN: 9781402082702
Sprache: englisch
Anzahl Seiten: 500

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Beschreibungen

The incessant development of quantum chemistry since the appearance of the Schrodinger ¨ equation has turned this area into a respectable branch of science with unprecedented capabilities. It is now a well-recognized eld of research with pred- tive power that is an important component in physical–chemical laboratories. Very important developments were conducted in the early days by bright theoretical s- entists that were ready to absorb the incredible and unpredicted computer revolution which was only just beginning. Isolated medium-size molecular systems can now be accurately studied theoretically by quantum chemical methods. However, it was also long recognized that all biomolecular phenomena necessary to obtain and sustain living systems take place in solution, as well as the vast majority of chemical p- cesses. Indeed solvent and liquid systems are germane in chemistry experiments. In physics, aconstant concern isthedescription of theroleplayed by theenvironment in modifying the properties of the system as compared to the isolated situation. Hence, the importance of studying atoms, molecules and biomolecules in the solvent en- ronment can hardly be denied. The quantum chemical studies of molecular systems affected by the interaction with a solvent had its own turning point before the end of the 1970s, when some pioneering work was done, including the dielectric pr- erties of the medium in an effective nonlinear Hamiltonian. This naturally led to the development of the so-called continuum models that are important and now popular. Continuum models can be implemented from the simplest to the most sophisticated quantum chemical methods.
Solvation Models for Molecular Properties: Continuum Versus Discrete Approaches.- The multipole moment expansion solvent continuum model: a brief review.- The Discrete Reaction Field approach for calculating solvent effects.- Thermochemical Analysis of the Hydration of Neutral Solutes.- Electronic Properties of Hydrogen Bond Networks: Implications for Solvent Effects in Polar Liquids.- Solvent Effects on Radiative and Non-Radiative Excited State Decays.- The Sequential qm/mm Method and its Applications to Solvent Effects in Electronic and Structural Properties of Solutes.- Statistical Mechanical Modeling of Chemical Reactions in Condensed Phase Systems.- An explicit quantum chemical solvent model for strongly coupled solute–solvent systems in ground or excited state.- Molecular Dynamics Simulation Methods including Quantum Effects.- Solvation In Polymers.- Hydrogen Bonds And Solvent Effects In Soil Processes: A Theoretical View.- Linear Response Theory in Connection to Density Functional Theory/Molecular Dynamics and Coupled Cluster/Molecular Dynamics Methods.- Combined QM/MM methods for the simulation of condensed phase processes using an approximate DFT approach.- Solvation of Hydrogen Bonded Systems: CH···O, OH···O, and Cooperativity.- Solvation in Supercritical Fluids.- A Quantum Chemical Approach to Free Energy Calculation for Chemical Reactions in Condensed System: Combination of a Quantum Chemical Method with a Theory of Statistical Mechanics.- Quantifying Solvation Effects on Peptide Conformations: A QM/MM Replica Exchange Study.
<P>Prof. Sylvio Canuto (editor of this review volume) is a professor of physics at University of Sao Paulo and is presently serving as:&nbsp;A member of the advisory editorial board of the Chemical Physics Letters (Elsevier); a member of the editorial board of the International Journal of Quantum Chemistry (John Wiley); a specialist editor of the Computer Physics Communications (North Holland); an associate editor of the Brazilian Journal of Physics; a member of the editorial board of the Journal of Computational Methods in Science and Engineering; a member of the International Scientific Advisory Board of the Journal of the Argentine Chemical Society. In addition to these duties, he is co-editor of the following SI volumes: an International Journal of Quantum Chemistry, 106 (2006) issue no. 13; an International Journal of Quantum Chemistry, 103 (2005) issue no. 5.; the Journal of Molecular Structure (Theochem), 464 (1999) issue 1-3.; the Brazilian Journal of Physics, 34 (2004) issue 1.; and the Brazilian Journal of Physics, 24 (1994) (part of) issue 4.</P>
<P>Prof. Canuto has co-edited the following books: Electronic Structure of Atoms, Molecules and Solids. Proceedings of the 2<SUP>nd</SUP> Brazilian School on Electronic Structure. J. DÁ. Castro, S. Canuto and F. Paixao. World Scientific, 1990.; and I Escola Brasileira de Estrutura Eletrônica, Ed. Universidade de Brasília (1989), 587 pages (in portuguese) and co-authored: Teoria Quântica de Moléculas e Sólidos, ed. Livraria da Física, (2004), 400 pages (in portuguese) J D M Vianna, A. Fazzio and S. Canuto.</P>
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<P><EM>Solvation Effects on Molecules and Biomolecules</EM> provides a comprehensive overview of state-of-the-art molecular modeling methodologies which are most relevant to handling solvation properties of molecules and biomolecules. The quantum mechanics and molecular simulations herein are presented by international experts. The chapters contain detailed reviews of the developments of various techniques, combining quantum mechanics and statistical mechanics methods which are commonly called upon to deal with various solvation problems including free energy studies and supercritical solvents.</P>
<P>Modern perspectives of the latest methods used for studying molecular properties, structure, and spectroscopy in liquid systems, (including solvation free energies of different physico-chemical processes) are presented in detail. By outlining the essential theoretical framework and technical details, together with practical applications, <EM>Solvation Effects on Molecules and Biomolecules </EM>serves as an essential guide in the promotion of interactions between theoretical and experimental groups. </P>
<P><EM>Solvation Effects on Molecules and Biomolecules</EM> thus forms a powerful resource for graduate students and fledgling researchers and is also an excellent companion for research professionals engaged in computational chemistry, material science, nanotechnology, physics, drug design, and molecular biochemistry (as well as attracting advanced undergraduate students working in these fields).</P>
Provides a quantum mechanical overview of solvation problems A single source guide to 'state of the art' theoretical chemistry methods which have been specifically developed to handle solvation effects

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